Analysis of protein sequences

analysis of plasmodium vivax merozoite surface protein-1 gene sequences

the emergence of plasmodium vivax in dashte moghan in northwestern iran has become a major concern for iranian's health officials. knowledge of genetic make up of the p. vivax populations in this area would give us an insight into the origin of the prevalent infections and the possible routes they are introduced. this paper reports the analysis of a variable region between the two interspecies ...

Spectral Analysis of Protein Sequences

Wang, Zhi. Spectral Analysis of Protein Sequences. (Under the direction of Dr. William R. Atchley and Dr. Charles E. Smith.) The purpose of this research is to elucidate how to apply spectral analysis methods to understand the structure, function and evolution of protein sequences. In the first part of this research, spectral analyses have been applied to the basichelix-loop-helix (bHLH) family...

Coevolution Analysis using Protein Sequences

woman-defined identity: analysis of selected poems of adrienne rich

the current thesis is composed in five chapters in the following fashion: chapter two encompasses the applied framework of the project in details; the methodology of carl gustav jung to explain the process of individuation, the major archetypes and their attributes and his techniques to assess the mind’s strata are all explained. moreover, the austrian psychoanalysts, heinz kohut’s models of a...

CAPS: coevolution analysis using protein sequences

UNLABELLED Coevolution Analysis using Protein Sequences (CAPS) is a PERL based software that identifies co-evolution between amino acid sites. Blosum-corrected amino acid distances are used to identify amino acid co-variation. The phylogenetic sequence relationships are used to remove the phylogenetic and stochastic dependencies between sites. The 3D protein structure is used to identify the na...